Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909277.1_cds_XP_016459492.1_53017
CDS Infomation

[gene=LOC107783047] [db_xref=GeneID:107783047] [protein=mannan endo-1,4-beta-mannosidase 1-like] [protein_id=XP_016459492.1] [location=complement(join(40058..40430,40558..40760,40853..40975,41137..41331,41614..41949))] [gbkey=CDS]
Sequence

ATGTCTTTTACAAGAACAATCTGTATTTCTGGGCTCTTGCTCTTGTTCCTAACTCTAGCA
TGTGAAGCTAGGTTTCCAAGAAATGCTAATGCAGGGTTCATAGCAGTGAATGGTGCTCAT
TTTGAACTCAATGGGTCCCCCTTTTTATTCAATGGTTTCAACTCCTATTGGTTGATGCAT
GTTGCTGCTGACCCAACTGAGAGGTACAAAGTCACTGAGGTTCTTAGAGATGCATCTGCT
GCTGGTCTTTCTGTTTGTCGTACTTGGGCTTTTAGTGATGGAGGTGATAGAGCATTACAA
ATGTCACCTGGAGTTTACGATGAACATGTCTTTCAGGGGTTGGATTTTGTGATCTCGGAA
GCTAAGAAATATGGTGTCCGCTTAATCTTGAGCTTTGTAAACAACTGGAACGACTTTGGA
GGAAAAGCTCAATATGTTCAGTGGGCAAGAAATGTTGGAGCACAAATTAGTGGCGACGAT
GACTTCTATACTCATCCTATGCTCAAAGATTATTACAAGAACCATATTAAGAAAGTCGTT
ACAAGGTTCAACACCATTACTAGAATTGCTTACAGAGATGATCCAACAATCATGGCATGG
GAACTCATTAATGAGCCACGCGACCAAGCTGACTATTCTGGAAAAACTGTTAATGCTTGG
GTTCAAGAAATGGCAAGTTTTGTGAAGTCAGTAGACAAAAAACACTTGTTGGAGATAGGA
ATGGAGGGATTTTATGGTGATTCAGTTCCTGAAAGGAAGCAAATTAATCCTGGTTATCAA
GTGGGAACAGATTTTATCATTAACCATCTTATCAATGAGATTGATTTTGCCACTATCCAT
GCATACACTGACCAATGGGTATCCGGACAAAGCGATGATGCACAATTGGCATGGATGCAA
AGATGGGTGACAAGCCATTGGGAAGATGCAAAAACCATACTAAAGAAACCTCTAGTACTA
TCTGAATTTGGCAAATCTAGCAGAGATCAAGGATACAACCTTAGTTCAAGAGATACATTC
ATGAGTAGTGTATATAGAAATATATACAATTTGGCAAAAGAAGAGGGAACCATGGCAGGA
AGCTTAGTATGGCAACTCATGGCACAAGGAATGGAGAATTATGATGATGGTTATTGTATT
GTTTTAGGACAAAACCCTTCAACTGCAGGAATAATTTCAGGTCAATCACATGCTATGACA
ACTTTGGCTAATCTAGTTCATAGCCCTTAA

Peptide Sequence

PEP ID

XP_016459492.1
PEP Infomation

PREDICTED: mannan endo-1,4-beta-mannosidase 1-like [Nicotiana tabacum]
Sequence

MSFTRTICISGLLLLFLTLACEARFPRNANAGFIAVNGAHFELNGSPFLFNGFNSYWLMH
VAADPTERYKVTEVLRDASAAGLSVCRTWAFSDGGDRALQMSPGVYDEHVFQGLDFVISE
AKKYGVRLILSFVNNWNDFGGKAQYVQWARNVGAQISGDDDFYTHPMLKDYYKNHIKKVV
TRFNTITRIAYRDDPTIMAWELINEPRDQADYSGKTVNAWVQEMASFVKSVDKKHLLEIG
MEGFYGDSVPERKQINPGYQVGTDFIINHLINEIDFATIHAYTDQWVSGQSDDAQLAWMQ
RWVTSHWEDAKTILKKPLVLSEFGKSSRDQGYNLSSRDTFMSSVYRNIYNLAKEEGTMAG
SLVWQLMAQGMENYDDGYCIVLGQNPSTAGIISGQSHAMTTLANLVHSP

Transcript Sequence

Gene sequence data has not been registered.